| System | NaCl |
| Number of atoms | 1000-1027 |
| Boundary condition | Reflect at the wall |
| Potential | Tosi-Fumi potential |
| Temperature | 300K-7200K |
| Ensenble | NVT |
| MD code | By Dr. Koishi |
| Time step | 2.0 fs |
| Total simulation time | 35 ps |
| System | Peptide (16 amino acid residues) |
| Number of atoms | Peptide(202)+water(25667)=25869 |
| SHAKE | All bond length were constrained |
| Boundary condition | Free |
| Temperature | 300K |
| Ensenble | NVT |
| MD code | AMBER 5.0 modified for MDGRAPE-2 |
| Time step | 1.0 fs |
| Totoal simulation time | 2.0 ns |